[3-29] 学术报告:Single Cell Gene Expression Network Biology of Mammalian Organ Development
报告题目:Single Cell Gene Expression Network Biology of Mammalian Organ Development
报 告 人: Prof. Bruce J Aronow
Cincinnati Children's Hospital Medical Center University of Cincinnati College of Medicine
邀 请 人: 林鑫华 研究员 010-64807970
报告时间: 2016年3月29日(周二)上午10:00
报告地点: 中国科学院动物研究所 C101会议室
Dr. Aronow works toward unraveling both the role and mechanism by which the functional capabilities of the human genome shape human health and our ability to adapt to stressful challenges. The Aronow lab focuses on collaborative research projects and the development of informatics systems that leverage multiple disciplines of knowledge, expertise and diverse data. The goal is to improve our collective ability to formulate high-impact inferences, hypotheses and next-stage experiments that could have the highest overall impact for biomedical research.
He leads a group that has extensive experience in building and analyzing cell and tissue expression profile databases, transcriptome, exome, methylation, and microRNA datatypes, and combines these with systems biology-oriented phenotype and regulatory and functional pathway and network analysis tools and resources.
The lab’s current research focus is to find or support efforts to solve problems relevant to genomic medicine by developing, both independently and collaboratively, new algorithms, tools and methodologies in translational bioinformatics. Dr. Aronow is also the first recipient of the John S. Hutton endowed Chair for Biomedical Informatics.
Honors /Awards/ Service:
1987 - 1989 National Research Service Award
1998 - 1999 Member, Chair, Mammalian Genome SBIR Biotechnology Study Section
2000 – 2006 Scientific Advisor “Critical Assessment of Microarray Data Analysis” @ Duke
2004 – 2006 Consultant; United States Environmental Protection Agency
2003 – 2008 Bioinformatics and Systems Biology Steering Committees NCI Mouse Models
2007 – Present Member, Ohio State Comprehensive Cancer Center;
2013- Present Scientific Advisory Panel, NHGRI LINCS Consortium Program
2016 Recipient, John J. Hutton Endowed Chair in Biomedical Informatics
Representative Publications:
1. Tsai WW, Wang Z, Yiu TT, Akdemir KC, Xia W, Winter S, Tsai CY, Shi X, Schwarzer D, Plunkett W, Aronow B, Gozani O, Fischle W, Hung MC, Patel DJ, Barton MC. TRIM24 links a non-canonical histone signature to breast cancer. Nature, 2010; 468(7326):927-32.
2. Powell AE, Wang Y, Li Y, Poulin EJ, Means AL, Washington MK, Higginbotham JN, Juchheim A, Prasad N, Levy SE, Guo Y, Shyr Y, Aronow BJ, Haigis KM, Franklin JL, Coffey RJ. The pan-ErbB negative regulator Lrig1 is an intestinal stem cell marker that functions as a tumor suppressor. Cell, 2012; 149(1):146-58.
3. Lynch JM, Maillet M, Vanhoutte D, Schloemer A, Sargent MA, Blair NS, Lynch KA, Okada T, Aronow BJ, Osinska H, Prywes R, Lorenz JN, Mori K, Lawler J, Robbins J, Molkentin JD. A Thrombospondin-Dependent Pathway for a Protective ER Stress Response. Cell, 2012; 149(6):1257-68.
4. Wilson EB, Yamada DH, Elsaesser H, Herskovitz J, Deng J, Cheng G, Aronow BJ, Karp CL, Brooks DG. Blockade of chronic type I interferon signaling to control persistent LCMV infection. Science, 2013; 340(6129):202-7.
5. Toledo CM, Ding Y, Hoellerbauer P, Davis RJ, Basom R, Girard EJ, Lee E, Corrin P, Hart T, Bolouri H, Davison J, Zhang Q, Hardcastle J, Aronow BJ, Plaisier CL, Baliga NS, Moffat J, Lin Q, Li XN, Nam DH, Lee J, Pollard SM, Zhu J, Delrow JJ, Clurman BE, Olson JM, Paddison PJ. Genome-wide CRISPR-Cas9 Screens Reveal Loss of Redundancy between PKMYT1 and WEE1 in Glioblastoma Stem-like Cells. Cell Rep. 2015; 13(11):2425-39.
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